Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Gm18782-201ENSMUST00000209023 1399 ntBASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Gm5939-201ENSMUST00000119613 2874 ntBASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Gm5419-201ENSMUST00000119301 527 ntBASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Gm11836-201ENSMUST00000121022 441 ntBASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Gm44421-201ENSMUST00000205064 1221 ntBASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Gm2875-201ENSMUST00000211333 360 ntBASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Gm26035-201ENSMUST00000083065 308 ntBASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Gm6903-201ENSMUST00000160509 1366 ntBASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hfm1D3Z4R1 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Hfm1D3Z4R1 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hfm1D3Z4R1 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hfm1D3Z4R1 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Hfm1D3Z4R1 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Hfm1D3Z4R1 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hfm1D3Z4R1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hfm1D3Z4R1 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hfm1D3Z4R1 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Hfm1D3Z4R1 Gm4310-201ENSMUST00000177847 889 ntBASIC17.39■□□□□ 0.38
Hfm1D3Z4R1 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Hfm1D3Z4R1 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC17.39■□□□□ 0.38
Hfm1D3Z4R1 Gm3551-201ENSMUST00000190750 664 ntBASIC17.39■□□□□ 0.38
Hfm1D3Z4R1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hfm1D3Z4R1 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Hfm1D3Z4R1 Gm18041-201ENSMUST00000218210 618 ntBASIC17.39■□□□□ 0.38
Hfm1D3Z4R1 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Hfm1D3Z4R1 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hfm1D3Z4R1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hfm1D3Z4R1 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hfm1D3Z4R1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Hfm1D3Z4R1 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Hfm1D3Z4R1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Hfm1D3Z4R1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hfm1D3Z4R1 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hfm1D3Z4R1 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hfm1D3Z4R1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hfm1D3Z4R1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hfm1D3Z4R1 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hfm1D3Z4R1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Hfm1D3Z4R1 AC238940.1-201ENSMUST00000225106 1858 ntBASIC17.39■□□□□ 0.37
Hfm1D3Z4R1 Gm43677-201ENSMUST00000198098 2378 ntBASIC17.39■□□□□ 0.37
Hfm1D3Z4R1 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hfm1D3Z4R1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hfm1D3Z4R1 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC17.39■□□□□ 0.37
Hfm1D3Z4R1 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hfm1D3Z4R1 Gm13600-201ENSMUST00000117949 744 ntBASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Gm5100-201ENSMUST00000195631 589 ntBASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Gm3619-201ENSMUST00000219947 775 ntBASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Gm18198-201ENSMUST00000204986 1551 ntBASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms