Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm11675-201ENSMUST00000121873 832 ntBASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.3□□□□□ -0.6
Shank1D3YZU1 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Gm38210-201ENSMUST00000191944 809 ntBASIC11.3□□□□□ -0.6
Shank1D3YZU1 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.3□□□□□ -0.6
Shank1D3YZU1 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.3□□□□□ -0.6
Shank1D3YZU1 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC11.3□□□□□ -0.6
Shank1D3YZU1 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.3□□□□□ -0.6
Shank1D3YZU1 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.3□□□□□ -0.6
Shank1D3YZU1 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.3□□□□□ -0.6
Shank1D3YZU1 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.3□□□□□ -0.6
Shank1D3YZU1 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.3□□□□□ -0.6
Shank1D3YZU1 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shank1D3YZU1 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Shank1D3YZU1 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.29□□□□□ -0.6
Shank1D3YZU1 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.29□□□□□ -0.6
Shank1D3YZU1 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms