Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Gm11618-201ENSMUST00000117946 267 ntBASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Gm11918-201ENSMUST00000121660 179 ntBASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Gm28693-202ENSMUST00000190758 331 ntBASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Gm6180-201ENSMUST00000065243 498 ntBASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Gm13612-201ENSMUST00000119276 390 ntBASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Gm6745-201ENSMUST00000199216 526 ntBASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Gm9908-201ENSMUST00000211534 448 ntBASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5-4A0A075B652 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms