Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm5538W4VSP6 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm5538W4VSP6 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.87□□□□□ -0.35
Gm5538W4VSP6 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Gm5538W4VSP6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm5538W4VSP6 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm5538W4VSP6 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm5538W4VSP6 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm5538W4VSP6 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm5538W4VSP6 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm5538W4VSP6 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm5538W4VSP6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Gm5538W4VSP6 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm5538W4VSP6 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm5538W4VSP6 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm5538W4VSP6 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm5538W4VSP6 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm5538W4VSP6 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm5538W4VSP6 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.87□□□□□ -0.35
Gm5538W4VSP6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Gm13315-201ENSMUST00000120376 991 ntBASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Gm24548-201ENSMUST00000158650 108 ntBASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Gm18054-201ENSMUST00000207539 555 ntBASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Gm19309-201ENSMUST00000218295 205 ntBASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Gm5781-201ENSMUST00000219792 443 ntBASIC12.86□□□□□ -0.35
Gm5538W4VSP6 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm5538W4VSP6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Gm13736-201ENSMUST00000119272 253 ntBASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Gm13875-201ENSMUST00000120162 282 ntBASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Gm8018-201ENSMUST00000173536 789 ntBASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Gm45880-201ENSMUST00000213041 853 ntBASIC12.85□□□□□ -0.35
Gm5538W4VSP6 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.85□□□□□ -0.35
Gm5538W4VSP6 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms