Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Gm14921-201ENSMUST00000118643 908 ntBASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Gm13616-201ENSMUST00000120600 222 ntBASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Gm14760-201ENSMUST00000121831 999 ntBASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Gm28693-202ENSMUST00000190758 331 ntBASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Gm44397-201ENSMUST00000195950 113 ntBASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Gm6983-201ENSMUST00000214912 628 ntBASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Gm16372-201ENSMUST00000073088 450 ntBASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Gm24694-201ENSMUST00000180054 110 ntBASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Gm27989-201ENSMUST00000184721 107 ntBASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Gm27663-201ENSMUST00000184839 110 ntBASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1bQ9Z2C6 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Upk1bQ9Z2C6 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk1bQ9Z2C6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Upk1bQ9Z2C6 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Upk1bQ9Z2C6 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Upk1bQ9Z2C6 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.67□□□□□ -0.54
Upk1bQ9Z2C6 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk1bQ9Z2C6 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk1bQ9Z2C6 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Upk1bQ9Z2C6 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Upk1bQ9Z2C6 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Upk1bQ9Z2C6 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk1bQ9Z2C6 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk1bQ9Z2C6 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.67□□□□□ -0.54
Upk1bQ9Z2C6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms