Protein–RNA interactions for Protein: Q9WU72

Tnfsf13b, Tumor necrosis factor ligand superfamily member 13B, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf13bQ9WU72 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Gm14644-201ENSMUST00000116671 647 ntBASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Gm14130-201ENSMUST00000118417 987 ntBASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Gm12997-201ENSMUST00000120207 640 ntBASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Gm44958-201ENSMUST00000203734 736 ntBASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf13bQ9WU72 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Gm26361-201ENSMUST00000158868 186 ntBASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf13bQ9WU72 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf13bQ9WU72 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms