Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Gm14822-201ENSMUST00000122247 291 ntBASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Hmgn5Q9JL35 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Gm22175-201ENSMUST00000175007 78 ntBASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Gm21854-201ENSMUST00000179901 471 ntBASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn5Q9JL35 Cog3-203ENSMUST00000227473 4197 ntBASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Gm15371-201ENSMUST00000117057 784 ntBASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Mir339-201ENSMUST00000083659 96 ntBASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn5Q9JL35 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Gm6211-201ENSMUST00000147973 4275 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms