Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Gm37458-201ENSMUST00000194055 410 ntBASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Gm18711-201ENSMUST00000199341 750 ntBASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Gm12029-201ENSMUST00000120073 832 ntBASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Gm29499-201ENSMUST00000189151 486 ntBASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Gm28329-201ENSMUST00000191208 689 ntBASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Gm29171-201ENSMUST00000191397 486 ntBASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Gm44882-201ENSMUST00000205702 802 ntBASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1fQ9JIS7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Gm12899-201ENSMUST00000120565 551 ntBASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Gm44270-201ENSMUST00000203084 1234 ntBASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 AC112945.1-201ENSMUST00000226413 514 ntBASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Gm11892-201ENSMUST00000117711 1202 ntBASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Gm15725-201ENSMUST00000119947 1090 ntBASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Gm11246-201ENSMUST00000120880 345 ntBASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1fQ9JIS7 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms