Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Gm11478-201ENSMUST00000117851 599 ntBASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Gm24231-201ENSMUST00000104315 133 ntBASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Gm26927-201ENSMUST00000182385 965 ntBASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Gm8602-201ENSMUST00000184045 607 ntBASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne8Q9DC53 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cpne8Q9DC53 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.12□□□□□ -0.31
Cpne8Q9DC53 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cpne8Q9DC53 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Cpne8Q9DC53 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpne8Q9DC53 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.12□□□□□ -0.31
Cpne8Q9DC53 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpne8Q9DC53 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.12□□□□□ -0.31
Cpne8Q9DC53 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cpne8Q9DC53 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms