Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Gm12502-201ENSMUST00000120197 444 ntBASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Gm7809-201ENSMUST00000153199 742 ntBASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Gm25261-201ENSMUST00000157416 134 ntBASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Gm16296-201ENSMUST00000159905 325 ntBASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Gm6222-202ENSMUST00000182143 629 ntBASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Gm38092-201ENSMUST00000195600 653 ntBASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa3Q9CQ71 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 AY702102-202ENSMUST00000194651 1173 ntBASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Gm5904-201ENSMUST00000210286 865 ntBASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa3Q9CQ71 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa3Q9CQ71 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa3Q9CQ71 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.34□□□□□ -0.27
Rpa3Q9CQ71 Pck2-205ENSMUST00000226352 2784 ntBASIC13.34□□□□□ -0.27
Rpa3Q9CQ71 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa3Q9CQ71 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa3Q9CQ71 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa3Q9CQ71 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa3Q9CQ71 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.34□□□□□ -0.27
Rpa3Q9CQ71 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa3Q9CQ71 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa3Q9CQ71 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rpa3Q9CQ71 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms