Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Gm15703-201ENSMUST00000120250 880 ntBASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.39□□□□□ -0.11
Trim11Q99PQ2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim11Q99PQ2 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.38□□□□□ -0.11
Trim11Q99PQ2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Gm26927-201ENSMUST00000182385 965 ntBASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Gm24526-201ENSMUST00000082921 158 ntBASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.38□□□□□ -0.11
Trim11Q99PQ2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms