Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Gm8546-201ENSMUST00000178288 1264 ntBASIC15.54■□□□□ 0.08
Trim34aQ99PP6 AY036118-201ENSMUST00000200021 923 ntBASIC15.54■□□□□ 0.08
Trim34aQ99PP6 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim34aQ99PP6 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Gm5523-201ENSMUST00000180415 997 ntBASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Gm18304-201ENSMUST00000189162 546 ntBASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 AU022133-201ENSMUST00000200601 873 ntBASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Gm44100-201ENSMUST00000204329 436 ntBASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 AC153974.2-201ENSMUST00000218577 1025 ntBASIC15.53■□□□□ 0.08
Trim34aQ99PP6 AC159205.5-202ENSMUST00000224849 386 ntBASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Gm9996-201ENSMUST00000070359 913 ntBASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Trim34aQ99PP6 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC15.52■□□□□ 0.08
Trim34aQ99PP6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim34aQ99PP6 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim34aQ99PP6 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim34aQ99PP6 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim34aQ99PP6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim34aQ99PP6 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trim34aQ99PP6 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim34aQ99PP6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trim34aQ99PP6 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim34aQ99PP6 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim34aQ99PP6 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC15.52■□□□□ 0.08
Trim34aQ99PP6 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim34aQ99PP6 Gm18734-201ENSMUST00000172937 808 ntBASIC15.52■□□□□ 0.08
Trim34aQ99PP6 Gm24514-201ENSMUST00000174961 285 ntBASIC15.52■□□□□ 0.08
Trim34aQ99PP6 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
Trim34aQ99PP6 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim34aQ99PP6 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim34aQ99PP6 AC131330.1-201ENSMUST00000227814 1015 ntBASIC15.52■□□□□ 0.08
Trim34aQ99PP6 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim34aQ99PP6 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trim34aQ99PP6 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim34aQ99PP6 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim34aQ99PP6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim34aQ99PP6 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms