Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.11□□□□□ -0.63
Scrt1Q99M85 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Scrt1Q99M85 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.11□□□□□ -0.63
Scrt1Q99M85 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Scrt1Q99M85 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scrt1Q99M85 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Scrt1Q99M85 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Gm23200-201ENSMUST00000104379 132 ntBASIC11.1□□□□□ -0.63
Scrt1Q99M85 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.1□□□□□ -0.63
Scrt1Q99M85 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.1□□□□□ -0.63
Scrt1Q99M85 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Gm2546-201ENSMUST00000182630 991 ntBASIC11.1□□□□□ -0.63
Scrt1Q99M85 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.1□□□□□ -0.63
Scrt1Q99M85 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.1□□□□□ -0.63
Scrt1Q99M85 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.1□□□□□ -0.63
Scrt1Q99M85 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scrt1Q99M85 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms