Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Gm6266-201ENSMUST00000203844 806 ntBASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Gm10156-201ENSMUST00000122364 462 ntBASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp1b1Q99LU0 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp1b1Q99LU0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp1b1Q99LU0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp1b1Q99LU0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp1b1Q99LU0 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.96□□□□□ -0.5
Chmp1b1Q99LU0 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp1b1Q99LU0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.96□□□□□ -0.5
Chmp1b1Q99LU0 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp1b1Q99LU0 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Chmp1b1Q99LU0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp1b1Q99LU0 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.96□□□□□ -0.5
Chmp1b1Q99LU0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Chmp1b1Q99LU0 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Chmp1b1Q99LU0 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp1b1Q99LU0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp1b1Q99LU0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp1b1Q99LU0 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp1b1Q99LU0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Chmp1b1Q99LU0 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp1b1Q99LU0 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Gm13123-201ENSMUST00000122173 492 ntBASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Gm22331-201ENSMUST00000158066 136 ntBASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms