Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cstf3Q99LI7 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.23□□□□□ -0.45
Cstf3Q99LI7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Gm8652-201ENSMUST00000181363 964 ntBASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.22□□□□□ -0.45
Cstf3Q99LI7 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Gm10146-201ENSMUST00000072739 309 ntBASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Gm26035-201ENSMUST00000083065 308 ntBASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cstf3Q99LI7 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cstf3Q99LI7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cstf3Q99LI7 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cstf3Q99LI7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cstf3Q99LI7 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cstf3Q99LI7 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cstf3Q99LI7 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Cstf3Q99LI7 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cstf3Q99LI7 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cstf3Q99LI7 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.21□□□□□ -0.46
Cstf3Q99LI7 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms