Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab28Q99KL7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab28Q99KL7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rab28Q99KL7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.2□□□□□ -0.46
Rab28Q99KL7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab28Q99KL7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab28Q99KL7 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Gm24231-201ENSMUST00000104315 133 ntBASIC12.19□□□□□ -0.46
Rab28Q99KL7 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Gm43179-201ENSMUST00000198797 275 ntBASIC12.19□□□□□ -0.46
Rab28Q99KL7 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.19□□□□□ -0.46
Rab28Q99KL7 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Rab28Q99KL7 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rab28Q99KL7 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.18□□□□□ -0.46
Rab28Q99KL7 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Gm12314-201ENSMUST00000118104 538 ntBASIC12.18□□□□□ -0.46
Rab28Q99KL7 Gm11222-201ENSMUST00000119005 738 ntBASIC12.18□□□□□ -0.46
Rab28Q99KL7 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.18□□□□□ -0.46
Rab28Q99KL7 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Gm2991-201ENSMUST00000173338 480 ntBASIC12.18□□□□□ -0.46
Rab28Q99KL7 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.18□□□□□ -0.46
Rab28Q99KL7 Gm6621-201ENSMUST00000193251 772 ntBASIC12.18□□□□□ -0.46
Rab28Q99KL7 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.18□□□□□ -0.46
Rab28Q99KL7 Gm3961-201ENSMUST00000204425 994 ntBASIC12.18□□□□□ -0.46
Rab28Q99KL7 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Cts7-204ENSMUST00000225321 1257 ntBASIC12.18□□□□□ -0.46
Rab28Q99KL7 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab28Q99KL7 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms