Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lims1Q99JW4 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Gm23984-201ENSMUST00000157139 203 ntBASIC11.51□□□□□ -0.57
Lims1Q99JW4 Gm27331-201ENSMUST00000183705 60 ntBASIC11.51□□□□□ -0.57
Lims1Q99JW4 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Gm18062-201ENSMUST00000208020 547 ntBASIC11.51□□□□□ -0.57
Lims1Q99JW4 Gm18055-201ENSMUST00000208254 547 ntBASIC11.51□□□□□ -0.57
Lims1Q99JW4 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.51□□□□□ -0.57
Lims1Q99JW4 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.51□□□□□ -0.57
Lims1Q99JW4 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.51□□□□□ -0.57
Lims1Q99JW4 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.51□□□□□ -0.57
Lims1Q99JW4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lims1Q99JW4 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.5□□□□□ -0.57
Lims1Q99JW4 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.5□□□□□ -0.57
Lims1Q99JW4 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.5□□□□□ -0.57
Lims1Q99JW4 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Gm11803-201ENSMUST00000119966 444 ntBASIC11.5□□□□□ -0.57
Lims1Q99JW4 Gm13323-201ENSMUST00000120245 1151 ntBASIC11.5□□□□□ -0.57
Lims1Q99JW4 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.5□□□□□ -0.57
Lims1Q99JW4 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Gm12091-201ENSMUST00000146791 830 ntBASIC11.5□□□□□ -0.57
Lims1Q99JW4 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Gm17208-201ENSMUST00000168388 535 ntBASIC11.5□□□□□ -0.57
Lims1Q99JW4 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.5□□□□□ -0.57
Lims1Q99JW4 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.5□□□□□ -0.57
Lims1Q99JW4 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.5□□□□□ -0.57
Lims1Q99JW4 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.5□□□□□ -0.57
Lims1Q99JW4 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.5□□□□□ -0.57
Lims1Q99JW4 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Lims1Q99JW4 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.5□□□□□ -0.57
Lims1Q99JW4 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Lims1Q99JW4 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.5□□□□□ -0.57
Lims1Q99JW4 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Gm6180-201ENSMUST00000065243 498 ntBASIC11.5□□□□□ -0.57
Lims1Q99JW4 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Gm25857-201ENSMUST00000082788 129 ntBASIC11.5□□□□□ -0.57
Lims1Q99JW4 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.5□□□□□ -0.57
Lims1Q99JW4 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.5□□□□□ -0.57
Lims1Q99JW4 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lims1Q99JW4 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms