Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col20a1Q923P0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col20a1Q923P0 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col20a1Q923P0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col20a1Q923P0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.9□□□□□ -0.02
Col20a1Q923P0 Gm11439-201ENSMUST00000118598 409 ntBASIC14.9□□□□□ -0.02
Col20a1Q923P0 Gm24990-201ENSMUST00000157406 323 ntBASIC14.9□□□□□ -0.02
Col20a1Q923P0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Col20a1Q923P0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col20a1Q923P0 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col20a1Q923P0 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.9□□□□□ -0.02
Col20a1Q923P0 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.9□□□□□ -0.02
Col20a1Q923P0 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.9□□□□□ -0.02
Col20a1Q923P0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col20a1Q923P0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col20a1Q923P0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Col20a1Q923P0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.89□□□□□ -0.03
Col20a1Q923P0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Gm13296-201ENSMUST00000117854 997 ntBASIC14.89□□□□□ -0.03
Col20a1Q923P0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.89□□□□□ -0.03
Col20a1Q923P0 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.89□□□□□ -0.03
Col20a1Q923P0 Gm26461-201ENSMUST00000175064 290 ntBASIC14.89□□□□□ -0.03
Col20a1Q923P0 Gm42937-201ENSMUST00000197360 752 ntBASIC14.89□□□□□ -0.03
Col20a1Q923P0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col20a1Q923P0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.88□□□□□ -0.03
Col20a1Q923P0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.88□□□□□ -0.03
Col20a1Q923P0 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Gm5070-201ENSMUST00000177599 862 ntBASIC14.88□□□□□ -0.03
Col20a1Q923P0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Gm19187-201ENSMUST00000206781 892 ntBASIC14.88□□□□□ -0.03
Col20a1Q923P0 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Col20a1Q923P0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col20a1Q923P0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col20a1Q923P0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col20a1Q923P0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.87□□□□□ -0.03
Col20a1Q923P0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
Col20a1Q923P0 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col20a1Q923P0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col20a1Q923P0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col20a1Q923P0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col20a1Q923P0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col20a1Q923P0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col20a1Q923P0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col20a1Q923P0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col20a1Q923P0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col20a1Q923P0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms