Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Gm14928-201ENSMUST00000120198 477 ntBASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Gm29011-201ENSMUST00000191059 712 ntBASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Gm45276-201ENSMUST00000209549 1086 ntBASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Gm7653-201ENSMUST00000214567 508 ntBASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 AC154848.1-201ENSMUST00000225451 846 ntBASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pcdhb3Q91XZ7 AC136019.1-201ENSMUST00000226503 1412 ntBASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Gm4732-201ENSMUST00000118778 473 ntBASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Gm18018-201ENSMUST00000198273 408 ntBASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb3Q91XZ7 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms