Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Gm14057-201ENSMUST00000120631 482 ntBASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Gm20949-201ENSMUST00000206478 952 ntBASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SfpqQ8VIJ6 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SfpqQ8VIJ6 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Gm27390-201ENSMUST00000184516 176 ntBASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Mir6392-201ENSMUST00000184924 108 ntBASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Gm37917-201ENSMUST00000194711 392 ntBASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Gm44855-201ENSMUST00000205725 362 ntBASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.29□□□□□ -0.28
SfpqQ8VIJ6 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms