Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.06□□□□□ -0.32
Trim60Q8VI40 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.06□□□□□ -0.32
Trim60Q8VI40 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim60Q8VI40 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.05□□□□□ -0.32
Trim60Q8VI40 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.05□□□□□ -0.32
Trim60Q8VI40 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim60Q8VI40 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Gm17208-201ENSMUST00000168388 535 ntBASIC13.05□□□□□ -0.32
Trim60Q8VI40 Proscos-202ENSMUST00000178990 666 ntBASIC13.05□□□□□ -0.32
Trim60Q8VI40 Gm37042-201ENSMUST00000193816 581 ntBASIC13.05□□□□□ -0.32
Trim60Q8VI40 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Gm8598-201ENSMUST00000221184 836 ntBASIC13.05□□□□□ -0.32
Trim60Q8VI40 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.05□□□□□ -0.32
Trim60Q8VI40 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim60Q8VI40 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.04□□□□□ -0.32
Trim60Q8VI40 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.04□□□□□ -0.32
Trim60Q8VI40 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Gm27390-201ENSMUST00000184516 176 ntBASIC13.04□□□□□ -0.32
Trim60Q8VI40 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.04□□□□□ -0.32
Trim60Q8VI40 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Matn2-203ENSMUST00000226766 3252 ntBASIC13.04□□□□□ -0.32
Trim60Q8VI40 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim60Q8VI40 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trim60Q8VI40 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.04□□□□□ -0.32
Trim60Q8VI40 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim60Q8VI40 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms