Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q8VDP2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.31□□□□□ -0.44
Q8VDP2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Q8VDP2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Q8VDP2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.31□□□□□ -0.44
Q8VDP2 Gm17968-201ENSMUST00000194902 784 ntBASIC12.31□□□□□ -0.44
Q8VDP2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Q8VDP2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q8VDP2 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC12.31□□□□□ -0.44
Q8VDP2 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q8VDP2 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Q8VDP2 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.31□□□□□ -0.44
Q8VDP2 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.31□□□□□ -0.44
Q8VDP2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q8VDP2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q8VDP2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Q8VDP2 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q8VDP2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.3□□□□□ -0.44
Q8VDP2 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Q8VDP2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.3□□□□□ -0.44
Q8VDP2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.3□□□□□ -0.44
Q8VDP2 Gm44872-201ENSMUST00000207864 420 ntBASIC12.3□□□□□ -0.44
Q8VDP2 Gm45612-201ENSMUST00000211320 160 ntBASIC12.3□□□□□ -0.44
Q8VDP2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.3□□□□□ -0.44
Q8VDP2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Q8VDP2 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Gm5403-201ENSMUST00000117105 2795 ntBASIC12.3□□□□□ -0.44
Q8VDP2 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC12.3□□□□□ -0.44
Q8VDP2 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Q8VDP2 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.3□□□□□ -0.44
Q8VDP2 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Q8VDP2 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q8VDP2 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Q8VDP2 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q8VDP2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Q8VDP2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Q8VDP2 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Q8VDP2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q8VDP2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.29□□□□□ -0.44
Q8VDP2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Q8VDP2 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q8VDP2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Q8VDP2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q8VDP2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.29□□□□□ -0.44
Q8VDP2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.29□□□□□ -0.44
Q8VDP2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.29□□□□□ -0.44
Q8VDP2 Rprl2-201ENSMUST00000157150 290 ntBASIC12.29□□□□□ -0.44
Q8VDP2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Q8VDP2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.29□□□□□ -0.44
Q8VDP2 Gm45747-201ENSMUST00000212203 999 ntBASIC12.29□□□□□ -0.44
Q8VDP2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q8VDP2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q8VDP2 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q8VDP2 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q8VDP2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q8VDP2 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC12.29□□□□□ -0.44
Q8VDP2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q8VDP2 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q8VDP2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.29□□□□□ -0.44
Q8VDP2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Q8VDP2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q8VDP2 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q8VDP2 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Q8VDP2 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q8VDP2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Q8VDP2 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q8VDP2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Q8VDP2 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q8VDP2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q8VDP2 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Q8VDP2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q8VDP2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Q8VDP2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Q8VDP2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q8VDP2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q8VDP2 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Q8VDP2 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q8VDP2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q8VDP2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms