Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Gm22323-201ENSMUST00000103832 109 ntBASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Gm23363-201ENSMUST00000175024 79 ntBASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Gm21769-201ENSMUST00000211922 111 ntBASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Ndc1Q8VCB1 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Gm11964-201ENSMUST00000120982 444 ntBASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Gm20482-202ENSMUST00000174729 825 ntBASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms