Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpap2Q8VC34 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpap2Q8VC34 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpap2Q8VC34 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpap2Q8VC34 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpap2Q8VC34 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpap2Q8VC34 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpap2Q8VC34 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpap2Q8VC34 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpap2Q8VC34 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rpap2Q8VC34 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Gm12742-201ENSMUST00000117326 410 ntBASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Gm13736-201ENSMUST00000119272 253 ntBASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.85□□□□□ -0.19
Rpap2Q8VC34 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpap2Q8VC34 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.84□□□□□ -0.19
Rpap2Q8VC34 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Gm13315-201ENSMUST00000120376 991 ntBASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Gm11597-201ENSMUST00000121423 964 ntBASIC13.84□□□□□ -0.19
Rpap2Q8VC34 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Gm8062-201ENSMUST00000139696 444 ntBASIC13.84□□□□□ -0.19
Rpap2Q8VC34 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Gm13316-201ENSMUST00000140537 691 ntBASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Gm43133-201ENSMUST00000197472 463 ntBASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Gm45880-201ENSMUST00000213041 853 ntBASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rpap2Q8VC34 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rpap2Q8VC34 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.83□□□□□ -0.19
Rpap2Q8VC34 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rpap2Q8VC34 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Rpap2Q8VC34 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Gm6023-201ENSMUST00000118217 606 ntBASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms