Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
Trim29Q8R2Q0 Gm24526-201ENSMUST00000082921 158 ntBASIC14.44□□□□□ -0.1
Trim29Q8R2Q0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim29Q8R2Q0 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim29Q8R2Q0 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.44□□□□□ -0.1
Trim29Q8R2Q0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trim29Q8R2Q0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim29Q8R2Q0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim29Q8R2Q0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Trim29Q8R2Q0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim29Q8R2Q0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim29Q8R2Q0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim29Q8R2Q0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim29Q8R2Q0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim29Q8R2Q0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim29Q8R2Q0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim29Q8R2Q0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim29Q8R2Q0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Gm12384-201ENSMUST00000119228 919 ntBASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Gm6266-201ENSMUST00000203844 806 ntBASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim29Q8R2Q0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Gm13492-201ENSMUST00000119772 665 ntBASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim29Q8R2Q0 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim29Q8R2Q0 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms