Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Mir874-201ENSMUST00000104769 76 ntBASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Gm15725-201ENSMUST00000119947 1090 ntBASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Gm9111-201ENSMUST00000219394 709 ntBASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx54Q8K4L0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Gm9072-201ENSMUST00000218390 1514 ntBASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Gm11949-201ENSMUST00000117640 372 ntBASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Cd63-ps-202ENSMUST00000154992 717 ntBASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Mt1-202ENSMUST00000211807 1085 ntBASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 AC115122.1-201ENSMUST00000224850 1040 ntBASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx54Q8K4L0 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Gm28719-201ENSMUST00000187779 1757 ntBASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Gm2875-201ENSMUST00000211333 360 ntBASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms