Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
ShfQ8CG80 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
ShfQ8CG80 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.25□□□□□ -0.61
ShfQ8CG80 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.25□□□□□ -0.61
ShfQ8CG80 Gm12203-201ENSMUST00000118235 598 ntBASIC11.25□□□□□ -0.61
ShfQ8CG80 Gm12209-201ENSMUST00000120089 596 ntBASIC11.25□□□□□ -0.61
ShfQ8CG80 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.25□□□□□ -0.61
ShfQ8CG80 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.25□□□□□ -0.61
ShfQ8CG80 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.25□□□□□ -0.61
ShfQ8CG80 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.25□□□□□ -0.61
ShfQ8CG80 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.25□□□□□ -0.61
ShfQ8CG80 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
ShfQ8CG80 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
ShfQ8CG80 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
ShfQ8CG80 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
ShfQ8CG80 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.25□□□□□ -0.61
ShfQ8CG80 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
ShfQ8CG80 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
ShfQ8CG80 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
ShfQ8CG80 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
ShfQ8CG80 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
ShfQ8CG80 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
ShfQ8CG80 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
ShfQ8CG80 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.24□□□□□ -0.61
ShfQ8CG80 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.24□□□□□ -0.61
ShfQ8CG80 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.24□□□□□ -0.61
ShfQ8CG80 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
ShfQ8CG80 Gm24196-201ENSMUST00000179161 110 ntBASIC11.24□□□□□ -0.61
ShfQ8CG80 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.24□□□□□ -0.61
ShfQ8CG80 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.24□□□□□ -0.61
ShfQ8CG80 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
ShfQ8CG80 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Gm24526-201ENSMUST00000082921 158 ntBASIC11.24□□□□□ -0.61
ShfQ8CG80 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
ShfQ8CG80 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
ShfQ8CG80 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.24□□□□□ -0.61
ShfQ8CG80 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
ShfQ8CG80 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
ShfQ8CG80 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
ShfQ8CG80 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms