Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm21198-201ENSMUST00000188393 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm21749-201ENSMUST00000189343 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm21901-201ENSMUST00000189568 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm29424-201ENSMUST00000189716 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm28599-201ENSMUST00000189838 694 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm21867-201ENSMUST00000189917 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm29269-201ENSMUST00000190087 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm21722-201ENSMUST00000190153 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm28423-201ENSMUST00000190701 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm21899-201ENSMUST00000190745 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm21910-201ENSMUST00000191163 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm21849-201ENSMUST00000191571 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm28678-201ENSMUST00000191593 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm20910-201ENSMUST00000193268 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm21871-201ENSMUST00000194621 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm20223-201ENSMUST00000199932 805 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm44213-201ENSMUST00000204977 703 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim35Q8C006 AL929265.1-201ENSMUST00000213427 125 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim35Q8C006 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trim35Q8C006 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trim35Q8C006 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim35Q8C006 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim35Q8C006 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Trim35Q8C006 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim35Q8C006 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim35Q8C006 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Trim35Q8C006 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim35Q8C006 Grk6-205ENSMUST00000224653 2976 ntBASIC14.02□□□□□ -0.16
Trim35Q8C006 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim35Q8C006 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim35Q8C006 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim35Q8C006 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trim35Q8C006 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim35Q8C006 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim35Q8C006 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim35Q8C006 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim35Q8C006 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim35Q8C006 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim35Q8C006 Gm28813-201ENSMUST00000186293 1497 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim35Q8C006 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim35Q8C006 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim35Q8C006 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim35Q8C006 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim35Q8C006 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim35Q8C006 Gm29324-202ENSMUST00000188242 1497 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim35Q8C006 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim35Q8C006 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim35Q8C006 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim35Q8C006 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim35Q8C006 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim35Q8C006 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim35Q8C006 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim35Q8C006 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim35Q8C006 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trim35Q8C006 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC14.02□□□□□ -0.17
Trim35Q8C006 Gm11991-201ENSMUST00000119652 1074 ntBASIC14.02□□□□□ -0.17
Trim35Q8C006 Gm13117-201ENSMUST00000120894 691 ntBASIC14.02□□□□□ -0.17
Trim35Q8C006 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim35Q8C006 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Trim35Q8C006 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim35Q8C006 Gm3371-202ENSMUST00000177827 489 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trim35Q8C006 Gm42646-201ENSMUST00000202233 914 ntBASIC14.02□□□□□ -0.17
Trim35Q8C006 AC102369.1-201ENSMUST00000218415 373 ntBASIC14.02□□□□□ -0.17
Trim35Q8C006 AC162467.1-201ENSMUST00000220254 621 ntBASIC14.02□□□□□ -0.17
Trim35Q8C006 AC165254.1-203ENSMUST00000222925 574 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim35Q8C006 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC14.02□□□□□ -0.17
Trim35Q8C006 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim35Q8C006 Cbx1-203ENSMUST00000093943 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim35Q8C006 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim35Q8C006 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.02□□□□□ -0.17
Trim35Q8C006 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim35Q8C006 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim35Q8C006 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim35Q8C006 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim35Q8C006 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trim35Q8C006 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.02□□□□□ -0.17
Trim35Q8C006 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim35Q8C006 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim35Q8C006 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim35Q8C006 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim35Q8C006 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim35Q8C006 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim35Q8C006 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms