Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Gm15703-201ENSMUST00000120250 880 ntBASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Mir7070-201ENSMUST00000183657 86 ntBASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Gm28882-201ENSMUST00000185504 314 ntBASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Gm44651-201ENSMUST00000207343 372 ntBASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.8□□□□□ -0.36
Sh3rf2Q8BZT2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Gm12314-201ENSMUST00000118104 538 ntBASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Rmrp-201ENSMUST00000157463 271 ntBASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Gm27341-201ENSMUST00000183570 106 ntBASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Rps4l-202ENSMUST00000204242 789 ntBASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Gm44262-201ENSMUST00000204969 372 ntBASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms