Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm38341-201ENSMUST00000195357 515 ntBASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Gm44364-201ENSMUST00000198368 141 ntBASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Gm25214-201ENSMUST00000104573 129 ntBASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Gm25043-201ENSMUST00000158604 212 ntBASIC12.92□□□□□ -0.34
Nup54Q8BTS4 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Gm26956-201ENSMUST00000182176 986 ntBASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Mir6420-201ENSMUST00000185032 102 ntBASIC12.92□□□□□ -0.34
Nup54Q8BTS4 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Gm30285-201ENSMUST00000214614 422 ntBASIC12.92□□□□□ -0.34
Nup54Q8BTS4 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup54Q8BTS4 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Gm27023-201ENSMUST00000182372 285 ntBASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Gm9022-201ENSMUST00000182482 992 ntBASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Gm7783-201ENSMUST00000204795 781 ntBASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Gm39404-201ENSMUST00000216350 313 ntBASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Gm10076-201ENSMUST00000073238 384 ntBASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms