Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Gm27525-201ENSMUST00000184465 107 ntBASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.4□□□□□ -0.74
Smco3Q8BQM7 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smco3Q8BQM7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smco3Q8BQM7 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smco3Q8BQM7 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.4□□□□□ -0.75
Smco3Q8BQM7 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.4□□□□□ -0.75
Smco3Q8BQM7 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smco3Q8BQM7 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smco3Q8BQM7 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Smco3Q8BQM7 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smco3Q8BQM7 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.4□□□□□ -0.75
Smco3Q8BQM7 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Smco3Q8BQM7 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.39□□□□□ -0.75
Smco3Q8BQM7 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Gm25144-201ENSMUST00000179561 110 ntBASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Gm25352-201ENSMUST00000179815 110 ntBASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Gm44344-201ENSMUST00000200287 129 ntBASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco3Q8BQM7 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms