Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.21□□□□□ -0.45
Rnf38Q8BI21 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf38Q8BI21 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf38Q8BI21 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf38Q8BI21 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf38Q8BI21 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rnf38Q8BI21 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf38Q8BI21 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf38Q8BI21 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf38Q8BI21 Gm12490-201ENSMUST00000120255 560 ntBASIC12.21□□□□□ -0.45
Rnf38Q8BI21 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.21□□□□□ -0.45
Rnf38Q8BI21 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.21□□□□□ -0.45
Rnf38Q8BI21 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.21□□□□□ -0.45
Rnf38Q8BI21 Gm5186-201ENSMUST00000218781 920 ntBASIC12.21□□□□□ -0.45
Rnf38Q8BI21 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf38Q8BI21 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf38Q8BI21 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf38Q8BI21 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf38Q8BI21 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf38Q8BI21 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf38Q8BI21 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Rnf38Q8BI21 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf38Q8BI21 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf38Q8BI21 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Rnf38Q8BI21 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Rnf38Q8BI21 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf38Q8BI21 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf38Q8BI21 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf38Q8BI21 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Rnf38Q8BI21 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf38Q8BI21 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.21□□□□□ -0.46
Rnf38Q8BI21 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.21□□□□□ -0.46
Rnf38Q8BI21 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf38Q8BI21 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf38Q8BI21 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Rnf38Q8BI21 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Proscos-202ENSMUST00000178990 666 ntBASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.2□□□□□ -0.46
Rnf38Q8BI21 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf38Q8BI21 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms