Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.02□□□□□ -0.49
Otub1Q7TQI3 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otub1Q7TQI3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.02□□□□□ -0.49
Otub1Q7TQI3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otub1Q7TQI3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Otub1Q7TQI3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otub1Q7TQI3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otub1Q7TQI3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otub1Q7TQI3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
Otub1Q7TQI3 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otub1Q7TQI3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Otub1Q7TQI3 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.02□□□□□ -0.49
Otub1Q7TQI3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otub1Q7TQI3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otub1Q7TQI3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Otub1Q7TQI3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.01□□□□□ -0.49
Otub1Q7TQI3 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otub1Q7TQI3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12□□□□□ -0.49
Otub1Q7TQI3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12□□□□□ -0.49
Otub1Q7TQI3 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Otub1Q7TQI3 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Otub1Q7TQI3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12□□□□□ -0.49
Otub1Q7TQI3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12□□□□□ -0.49
Otub1Q7TQI3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12□□□□□ -0.49
Otub1Q7TQI3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Otub1Q7TQI3 Gm27892-201ENSMUST00000185017 106 ntBASIC12□□□□□ -0.49
Otub1Q7TQI3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Otub1Q7TQI3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Otub1Q7TQI3 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Gm38049-201ENSMUST00000195698 1372 ntBASIC12□□□□□ -0.49
Otub1Q7TQI3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12□□□□□ -0.49
Otub1Q7TQI3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Gm20554-201ENSMUST00000177421 2352 ntBASIC12□□□□□ -0.49
Otub1Q7TQI3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Otub1Q7TQI3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12□□□□□ -0.49
Otub1Q7TQI3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12□□□□□ -0.49
Otub1Q7TQI3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12□□□□□ -0.49
Otub1Q7TQI3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.99□□□□□ -0.49
Otub1Q7TQI3 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otub1Q7TQI3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.99□□□□□ -0.49
Otub1Q7TQI3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms