Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Gm5866-201ENSMUST00000177881 973 ntBASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Gm10012-201ENSMUST00000078252 192 ntBASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rad54bQ6PFE3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Gm4768-201ENSMUST00000206199 686 ntBASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rad54bQ6PFE3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.71□□□□□ -0.38
Rad54bQ6PFE3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rad54bQ6PFE3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rad54bQ6PFE3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rad54bQ6PFE3 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rad54bQ6PFE3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rad54bQ6PFE3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rad54bQ6PFE3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rad54bQ6PFE3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Rad54bQ6PFE3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Rad54bQ6PFE3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Rad54bQ6PFE3 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Rad54bQ6PFE3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rad54bQ6PFE3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rad54bQ6PFE3 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rad54bQ6PFE3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rad54bQ6PFE3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rad54bQ6PFE3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rad54bQ6PFE3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rad54bQ6PFE3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rad54bQ6PFE3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rad54bQ6PFE3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms