Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Gm13035-201ENSMUST00000117496 342 ntBASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Gm38092-201ENSMUST00000195600 653 ntBASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Gm13736-201ENSMUST00000119272 253 ntBASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Gm12628-201ENSMUST00000122193 382 ntBASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc85bQ6PDY0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Gm24845-201ENSMUST00000158034 109 ntBASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Gm9132-201ENSMUST00000210182 832 ntBASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc85bQ6PDY0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms