Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Gm37513-201ENSMUST00000194830 2268 ntBASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Gm38378-201ENSMUST00000195153 2268 ntBASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Gm38355-201ENSMUST00000192514 1570 ntBASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Gm2965-201ENSMUST00000198365 343 ntBASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Gm18711-201ENSMUST00000199341 750 ntBASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Gm10752-201ENSMUST00000218348 729 ntBASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 AC121960.1-201ENSMUST00000227982 564 ntBASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd4Q6PDQ2 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Gm13461-201ENSMUST00000120980 662 ntBASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 AC141438.2-201ENSMUST00000215068 271 ntBASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 AC135114.1-201ENSMUST00000228682 270 ntBASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Gm43267-201ENSMUST00000199664 1796 ntBASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Gm18636-201ENSMUST00000218846 1066 ntBASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd4Q6PDQ2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms