Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kdm3aQ6PCM1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Kdm3aQ6PCM1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kdm3aQ6PCM1 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kdm3aQ6PCM1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.19■□□□□ 0.02
Kdm3aQ6PCM1 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kdm3aQ6PCM1 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.19■□□□□ 0.02
Kdm3aQ6PCM1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kdm3aQ6PCM1 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Kdm3aQ6PCM1 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kdm3aQ6PCM1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Kdm3aQ6PCM1 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Kdm3aQ6PCM1 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kdm3aQ6PCM1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Gm45691-201ENSMUST00000206905 1120 ntBASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 AC123857.2-201ENSMUST00000225756 1582 ntBASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 AC122197.2-201ENSMUST00000219196 1635 ntBASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.18■□□□□ 0.02
Kdm3aQ6PCM1 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Gm12286-201ENSMUST00000119246 1002 ntBASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Rprl1-202ENSMUST00000198476 238 ntBASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Gm44967-201ENSMUST00000207047 631 ntBASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 AC123665.1-201ENSMUST00000228204 438 ntBASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Gm14130-201ENSMUST00000118417 987 ntBASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Kdm3aQ6PCM1 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms