Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.53□□□□□ -0.56
VcanQ62059 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
VcanQ62059 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.53□□□□□ -0.56
VcanQ62059 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
VcanQ62059 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Gm12906-201ENSMUST00000154610 441 ntBASIC11.53□□□□□ -0.56
VcanQ62059 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.53□□□□□ -0.56
VcanQ62059 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.53□□□□□ -0.56
VcanQ62059 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.53□□□□□ -0.56
VcanQ62059 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.53□□□□□ -0.56
VcanQ62059 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
VcanQ62059 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
VcanQ62059 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
VcanQ62059 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC11.53□□□□□ -0.56
VcanQ62059 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
VcanQ62059 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.53□□□□□ -0.56
VcanQ62059 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.53□□□□□ -0.56
VcanQ62059 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.53□□□□□ -0.56
VcanQ62059 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.53□□□□□ -0.56
VcanQ62059 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
VcanQ62059 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
VcanQ62059 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VcanQ62059 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
VcanQ62059 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
VcanQ62059 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
VcanQ62059 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
VcanQ62059 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
VcanQ62059 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.52□□□□□ -0.56
VcanQ62059 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
VcanQ62059 Mir744-201ENSMUST00000103261 100 ntBASIC11.52□□□□□ -0.56
VcanQ62059 Gm11509-201ENSMUST00000117358 325 ntBASIC11.52□□□□□ -0.56
VcanQ62059 Gm11619-201ENSMUST00000117474 237 ntBASIC11.52□□□□□ -0.56
VcanQ62059 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.52□□□□□ -0.56
VcanQ62059 Gm6450-201ENSMUST00000200896 574 ntBASIC11.52□□□□□ -0.56
VcanQ62059 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
VcanQ62059 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
VcanQ62059 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
VcanQ62059 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
VcanQ62059 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
VcanQ62059 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VcanQ62059 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
VcanQ62059 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
VcanQ62059 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.52□□□□□ -0.57
VcanQ62059 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VcanQ62059 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
VcanQ62059 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
VcanQ62059 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
VcanQ62059 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
VcanQ62059 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VcanQ62059 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
VcanQ62059 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VcanQ62059 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VcanQ62059 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
VcanQ62059 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
VcanQ62059 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
VcanQ62059 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
VcanQ62059 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
VcanQ62059 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.52□□□□□ -0.57
VcanQ62059 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VcanQ62059 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VcanQ62059 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
VcanQ62059 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
VcanQ62059 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC11.51□□□□□ -0.57
VcanQ62059 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.51□□□□□ -0.57
VcanQ62059 Gm17944-201ENSMUST00000186351 643 ntBASIC11.51□□□□□ -0.57
VcanQ62059 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.51□□□□□ -0.57
VcanQ62059 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
VcanQ62059 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC11.51□□□□□ -0.57
VcanQ62059 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC11.51□□□□□ -0.57
VcanQ62059 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.51□□□□□ -0.57
VcanQ62059 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VcanQ62059 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VcanQ62059 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
VcanQ62059 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VcanQ62059 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VcanQ62059 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
VcanQ62059 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VcanQ62059 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.51□□□□□ -0.57
VcanQ62059 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VcanQ62059 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.51□□□□□ -0.57
VcanQ62059 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms