Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rai1Q61818 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rai1Q61818 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rai1Q61818 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rai1Q61818 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.04□□□□□ -0.48
Rai1Q61818 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rai1Q61818 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rai1Q61818 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rai1Q61818 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rai1Q61818 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rai1Q61818 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rai1Q61818 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rai1Q61818 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.04□□□□□ -0.48
Rai1Q61818 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rai1Q61818 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rai1Q61818 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rai1Q61818 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rai1Q61818 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.04□□□□□ -0.48
Rai1Q61818 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rai1Q61818 Gm28686-201ENSMUST00000187404 609 ntBASIC12.04□□□□□ -0.48
Rai1Q61818 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rai1Q61818 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Rai1Q61818 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rai1Q61818 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rai1Q61818 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rai1Q61818 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rai1Q61818 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rai1Q61818 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.03□□□□□ -0.48
Rai1Q61818 Gm13888-201ENSMUST00000119148 422 ntBASIC12.03□□□□□ -0.48
Rai1Q61818 Gm7722-201ENSMUST00000120646 741 ntBASIC12.03□□□□□ -0.48
Rai1Q61818 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.03□□□□□ -0.48
Rai1Q61818 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.03□□□□□ -0.48
Rai1Q61818 Mir7677-201ENSMUST00000184226 67 ntBASIC12.03□□□□□ -0.48
Rai1Q61818 Gm18304-201ENSMUST00000189162 546 ntBASIC12.03□□□□□ -0.48
Rai1Q61818 Gm3332-201ENSMUST00000189337 928 ntBASIC12.03□□□□□ -0.48
Rai1Q61818 Gm43184-201ENSMUST00000197247 542 ntBASIC12.03□□□□□ -0.48
Rai1Q61818 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.03□□□□□ -0.48
Rai1Q61818 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Gm26035-201ENSMUST00000083065 308 ntBASIC12.03□□□□□ -0.48
Rai1Q61818 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.03□□□□□ -0.48
Rai1Q61818 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rai1Q61818 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rai1Q61818 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.02□□□□□ -0.48
Rai1Q61818 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rai1Q61818 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rai1Q61818 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rai1Q61818 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rai1Q61818 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rai1Q61818 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.02□□□□□ -0.48
Rai1Q61818 Gm15595-201ENSMUST00000120840 961 ntBASIC12.02□□□□□ -0.48
Rai1Q61818 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Rai1Q61818 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rai1Q61818 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.02□□□□□ -0.48
Rai1Q61818 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.02□□□□□ -0.48
Rai1Q61818 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Rai1Q61818 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rai1Q61818 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rai1Q61818 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rai1Q61818 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rai1Q61818 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rai1Q61818 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rai1Q61818 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rai1Q61818 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rai1Q61818 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rai1Q61818 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rai1Q61818 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rai1Q61818 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rai1Q61818 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rai1Q61818 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.02□□□□□ -0.49
Rai1Q61818 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rai1Q61818 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.02□□□□□ -0.49
Rai1Q61818 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rai1Q61818 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.02□□□□□ -0.49
Rai1Q61818 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rai1Q61818 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.02□□□□□ -0.49
Rai1Q61818 Gm13809-201ENSMUST00000117921 597 ntBASIC12.02□□□□□ -0.49
Rai1Q61818 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms