Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd47Q61735 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd47Q61735 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd47Q61735 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.59□□□□□ -0.55
Cd47Q61735 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cd47Q61735 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.59□□□□□ -0.55
Cd47Q61735 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.55
Cd47Q61735 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Cd47Q61735 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Cd47Q61735 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cd47Q61735 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cd47Q61735 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cd47Q61735 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.58□□□□□ -0.56
Cd47Q61735 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.58□□□□□ -0.56
Cd47Q61735 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.58□□□□□ -0.56
Cd47Q61735 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.58□□□□□ -0.56
Cd47Q61735 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.58□□□□□ -0.56
Cd47Q61735 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cd47Q61735 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.58□□□□□ -0.56
Cd47Q61735 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cd47Q61735 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.58□□□□□ -0.56
Cd47Q61735 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.58□□□□□ -0.56
Cd47Q61735 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Gm9519-201ENSMUST00000206108 1337 ntBASIC11.58□□□□□ -0.56
Cd47Q61735 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.58□□□□□ -0.56
Cd47Q61735 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd47Q61735 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cd47Q61735 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Cd47Q61735 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cd47Q61735 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Cd47Q61735 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.57□□□□□ -0.56
Cd47Q61735 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Gm12091-201ENSMUST00000146791 830 ntBASIC11.57□□□□□ -0.56
Cd47Q61735 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.57□□□□□ -0.56
Cd47Q61735 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.57□□□□□ -0.56
Cd47Q61735 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Cd47Q61735 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.57□□□□□ -0.56
Cd47Q61735 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cd47Q61735 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.57□□□□□ -0.56
Cd47Q61735 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.57□□□□□ -0.56
Cd47Q61735 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cd47Q61735 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd47Q61735 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.57□□□□□ -0.56
Cd47Q61735 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Cd47Q61735 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cd47Q61735 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd47Q61735 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms