Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Ripk1Q60855 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ripk1Q60855 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ripk1Q60855 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ripk1Q60855 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.93□□□□□ -0.5
Ripk1Q60855 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ripk1Q60855 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ripk1Q60855 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ripk1Q60855 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ripk1Q60855 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ripk1Q60855 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ripk1Q60855 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.93□□□□□ -0.5
Ripk1Q60855 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ripk1Q60855 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ripk1Q60855 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ripk1Q60855 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.93□□□□□ -0.5
Ripk1Q60855 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ripk1Q60855 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ripk1Q60855 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.92□□□□□ -0.5
Ripk1Q60855 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ripk1Q60855 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.92□□□□□ -0.5
Ripk1Q60855 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ripk1Q60855 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ripk1Q60855 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Ripk1Q60855 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ripk1Q60855 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.92□□□□□ -0.5
Ripk1Q60855 Snord83b-201ENSMUST00000104546 94 ntBASIC11.92□□□□□ -0.5
Ripk1Q60855 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.92□□□□□ -0.5
Ripk1Q60855 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.92□□□□□ -0.5
Ripk1Q60855 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.92□□□□□ -0.5
Ripk1Q60855 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.92□□□□□ -0.5
Ripk1Q60855 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.92□□□□□ -0.5
Ripk1Q60855 Gm29127-201ENSMUST00000188304 517 ntBASIC11.92□□□□□ -0.5
Ripk1Q60855 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Gm19163-201ENSMUST00000223313 780 ntBASIC11.92□□□□□ -0.5
Ripk1Q60855 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.92□□□□□ -0.5
Ripk1Q60855 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.92□□□□□ -0.5
Ripk1Q60855 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ripk1Q60855 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.92□□□□□ -0.5
Ripk1Q60855 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.91□□□□□ -0.5
Ripk1Q60855 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.91□□□□□ -0.5
Ripk1Q60855 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ripk1Q60855 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.91□□□□□ -0.5
Ripk1Q60855 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Gm7029-201ENSMUST00000173226 450 ntBASIC11.91□□□□□ -0.5
Ripk1Q60855 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Gm26927-201ENSMUST00000182385 965 ntBASIC11.91□□□□□ -0.5
Ripk1Q60855 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.91□□□□□ -0.5
Ripk1Q60855 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.91□□□□□ -0.5
Ripk1Q60855 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Ripk1Q60855 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ripk1Q60855 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms