Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col12a1Q60847 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.14□□□□□ -0.47
Col12a1Q60847 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.14□□□□□ -0.47
Col12a1Q60847 Gm45481-201ENSMUST00000209717 877 ntBASIC12.14□□□□□ -0.47
Col12a1Q60847 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Col12a1Q60847 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC12.14□□□□□ -0.47
Col12a1Q60847 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Gm12663-201ENSMUST00000118481 958 ntBASIC12.13□□□□□ -0.47
Col12a1Q60847 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Gm42816-201ENSMUST00000198433 325 ntBASIC12.13□□□□□ -0.47
Col12a1Q60847 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Gm12419-201ENSMUST00000116649 636 ntBASIC12.13□□□□□ -0.47
Col12a1Q60847 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Gm44958-201ENSMUST00000203734 736 ntBASIC12.13□□□□□ -0.47
Col12a1Q60847 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.13□□□□□ -0.47
Col12a1Q60847 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Gm11942-201ENSMUST00000180255 345 ntBASIC12.13□□□□□ -0.47
Col12a1Q60847 Gm18801-201ENSMUST00000186616 536 ntBASIC12.13□□□□□ -0.47
Col12a1Q60847 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Col12a1Q60847 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col12a1Q60847 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Col12a1Q60847 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.12□□□□□ -0.47
Col12a1Q60847 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.12□□□□□ -0.47
Col12a1Q60847 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.12□□□□□ -0.47
Col12a1Q60847 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC12.12□□□□□ -0.47
Col12a1Q60847 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col12a1Q60847 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.12□□□□□ -0.47
Col12a1Q60847 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.12□□□□□ -0.47
Col12a1Q60847 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.12□□□□□ -0.47
Col12a1Q60847 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms