Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Gm28195-201ENSMUST00000186992 372 ntBASIC13.33□□□□□ -0.28
Foxd4Q60688 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxd4Q60688 Gm37452-201ENSMUST00000194416 1160 ntBASIC13.33□□□□□ -0.28
Foxd4Q60688 Gm37917-201ENSMUST00000194711 392 ntBASIC13.33□□□□□ -0.28
Foxd4Q60688 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.33□□□□□ -0.28
Foxd4Q60688 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxd4Q60688 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxd4Q60688 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Foxd4Q60688 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Foxd4Q60688 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Foxd4Q60688 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Foxd4Q60688 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Foxd4Q60688 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxd4Q60688 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Foxd4Q60688 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxd4Q60688 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.33□□□□□ -0.28
Foxd4Q60688 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxd4Q60688 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxd4Q60688 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxd4Q60688 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.32□□□□□ -0.28
Foxd4Q60688 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxd4Q60688 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxd4Q60688 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Foxd4Q60688 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxd4Q60688 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxd4Q60688 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Foxd4Q60688 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Foxd4Q60688 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxd4Q60688 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxd4Q60688 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Foxd4Q60688 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Foxd4Q60688 Olfr1511-202ENSMUST00000214168 1468 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Foxd4Q60688 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxd4Q60688 Gm7350-201ENSMUST00000120964 636 ntBASIC13.32□□□□□ -0.28
Foxd4Q60688 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.32□□□□□ -0.28
Foxd4Q60688 Gm13844-201ENSMUST00000134541 581 ntTSL 3 BASIC13.32□□□□□ -0.28
Foxd4Q60688 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Foxd4Q60688 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.32□□□□□ -0.28
Foxd4Q60688 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC13.32□□□□□ -0.28
Foxd4Q60688 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.32□□□□□ -0.28
Foxd4Q60688 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Foxd4Q60688 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Foxd4Q60688 AC121986.1-201ENSMUST00000218588 781 ntBASIC13.32□□□□□ -0.28
Foxd4Q60688 AC126043.1-201ENSMUST00000221304 1141 ntBASIC13.32□□□□□ -0.28
Foxd4Q60688 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Foxd4Q60688 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Foxd4Q60688 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxd4Q60688 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Foxd4Q60688 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Foxd4Q60688 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxd4Q60688 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Foxd4Q60688 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxd4Q60688 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxd4Q60688 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxd4Q60688 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxd4Q60688 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Foxd4Q60688 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Foxd4Q60688 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Foxd4Q60688 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Foxd4Q60688 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.31□□□□□ -0.28
Foxd4Q60688 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Foxd4Q60688 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Gm15161-201ENSMUST00000117340 387 ntBASIC13.31□□□□□ -0.28
Foxd4Q60688 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Foxd4Q60688 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Foxd4Q60688 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Foxd4Q60688 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Foxd4Q60688 Gm27772-201ENSMUST00000184900 187 ntBASIC13.31□□□□□ -0.28
Foxd4Q60688 Gm37355-201ENSMUST00000193345 606 ntBASIC13.31□□□□□ -0.28
Foxd4Q60688 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.31□□□□□ -0.28
Foxd4Q60688 9930120I10Rik-201ENSMUST00000203027 865 ntBASIC13.31□□□□□ -0.28
Foxd4Q60688 AC116589.4-201ENSMUST00000222390 216 ntBASIC13.31□□□□□ -0.28
Foxd4Q60688 AC096628.1-201ENSMUST00000226060 641 ntBASIC13.31□□□□□ -0.28
Foxd4Q60688 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Foxd4Q60688 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Foxd4Q60688 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Foxd4Q60688 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Foxd4Q60688 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxd4Q60688 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms