Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
ClpbQ60649 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.14□□□□□ -0.47
ClpbQ60649 Gm45331-201ENSMUST00000209868 554 ntBASIC12.14□□□□□ -0.47
ClpbQ60649 Gm6013-201ENSMUST00000212264 699 ntBASIC12.14□□□□□ -0.47
ClpbQ60649 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.14□□□□□ -0.47
ClpbQ60649 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.14□□□□□ -0.47
ClpbQ60649 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.14□□□□□ -0.47
ClpbQ60649 Snora73a-201ENSMUST00000082453 205 ntBASIC12.14□□□□□ -0.47
ClpbQ60649 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ClpbQ60649 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ClpbQ60649 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ClpbQ60649 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.14□□□□□ -0.47
ClpbQ60649 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.14□□□□□ -0.47
ClpbQ60649 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClpbQ60649 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ClpbQ60649 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.13□□□□□ -0.47
ClpbQ60649 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.13□□□□□ -0.47
ClpbQ60649 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ClpbQ60649 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.13□□□□□ -0.47
ClpbQ60649 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.13□□□□□ -0.47
ClpbQ60649 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.13□□□□□ -0.47
ClpbQ60649 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ClpbQ60649 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.13□□□□□ -0.47
ClpbQ60649 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.13□□□□□ -0.47
ClpbQ60649 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ClpbQ60649 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpbQ60649 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.13□□□□□ -0.47
ClpbQ60649 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ClpbQ60649 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
ClpbQ60649 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
ClpbQ60649 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.12□□□□□ -0.47
ClpbQ60649 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
ClpbQ60649 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
ClpbQ60649 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.12□□□□□ -0.47
ClpbQ60649 Gm37042-201ENSMUST00000193816 581 ntBASIC12.12□□□□□ -0.47
ClpbQ60649 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.12□□□□□ -0.47
ClpbQ60649 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.12□□□□□ -0.47
ClpbQ60649 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ClpbQ60649 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
ClpbQ60649 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpbQ60649 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
ClpbQ60649 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.12□□□□□ -0.47
ClpbQ60649 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms