Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Gm45575-201ENSMUST00000210283 548 ntBASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Gm12663-201ENSMUST00000118481 958 ntBASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Gm12453-201ENSMUST00000121981 331 ntBASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Gm43854-201ENSMUST00000200418 394 ntBASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13aQ5H8C4 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm12036-201ENSMUST00000120008 530 ntBASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm8343-201ENSMUST00000182705 994 ntBASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm25053-201ENSMUST00000103982 133 ntBASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm26286-201ENSMUST00000104166 134 ntBASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm25922-201ENSMUST00000104281 130 ntBASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm24679-201ENSMUST00000158762 111 ntBASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Mir3060-201ENSMUST00000175339 83 ntBASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm25053-202ENSMUST00000199731 132 ntBASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm35960-201ENSMUST00000202712 767 ntBASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm11663-201ENSMUST00000117888 290 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms