Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm42937-201ENSMUST00000197360 752 ntBASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Gm10076-201ENSMUST00000073238 384 ntBASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Gm6991-201ENSMUST00000218475 1178 ntBASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Rc3h1Q4VGL6 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Rmrp-201ENSMUST00000157463 271 ntBASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Gm25700-201ENSMUST00000177693 110 ntBASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Gm28882-201ENSMUST00000185504 314 ntBASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Gm37466-201ENSMUST00000195692 652 ntBASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rc3h1Q4VGL6 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Rc3h1Q4VGL6 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rc3h1Q4VGL6 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rc3h1Q4VGL6 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rc3h1Q4VGL6 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms