Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Gm9083-201ENSMUST00000120423 819 ntBASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Gm11964-201ENSMUST00000120982 444 ntBASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm29609Q3UU56 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Gm11222-201ENSMUST00000119005 738 ntBASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm29609Q3UU56 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Gm5687-201ENSMUST00000118252 640 ntBASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Gm11978-201ENSMUST00000122315 466 ntBASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Gm8194-201ENSMUST00000159783 859 ntBASIC13.3□□□□□ -0.28
Gm29609Q3UU56 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Gm5051-201ENSMUST00000204085 485 ntBASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Gm45219-201ENSMUST00000205602 465 ntBASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.3□□□□□ -0.28
Gm29609Q3UU56 Itm2b-204ENSMUST00000228637 783 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms