Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Gm12314-201ENSMUST00000118104 538 ntBASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Gm4726-201ENSMUST00000135604 736 ntBASIC12.68□□□□□ -0.38
Fam196aQ3USH1 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Gm6019-201ENSMUST00000148369 736 ntBASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Gm23771-201ENSMUST00000178702 110 ntBASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Gm27910-201ENSMUST00000185004 107 ntBASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.68□□□□□ -0.38
Fam196aQ3USH1 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Matn2-206ENSMUST00000228570 2798 ntBASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fam196aQ3USH1 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Gm13809-201ENSMUST00000117921 597 ntBASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.67□□□□□ -0.38
Fam196aQ3USH1 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Gm5298-201ENSMUST00000201122 892 ntBASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Gm26448-201ENSMUST00000082446 203 ntBASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms