Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.36□□□□□ -0.11
Gm28047Q3US59 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.36□□□□□ -0.11
Gm28047Q3US59 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gm28047Q3US59 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Gm11964-201ENSMUST00000120982 444 ntBASIC14.35□□□□□ -0.11
Gm28047Q3US59 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gm28047Q3US59 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28047Q3US59 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Daam2-202ENSMUST00000224595 1926 ntBASIC14.35□□□□□ -0.11
Gm28047Q3US59 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.35□□□□□ -0.11
Gm28047Q3US59 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28047Q3US59 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.34□□□□□ -0.11
Gm28047Q3US59 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28047Q3US59 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28047Q3US59 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28047Q3US59 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gm28047Q3US59 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.34□□□□□ -0.11
Gm28047Q3US59 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gm28047Q3US59 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.34□□□□□ -0.11
Gm28047Q3US59 Gm13492-201ENSMUST00000119772 665 ntBASIC14.34□□□□□ -0.11
Gm28047Q3US59 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Gm28047Q3US59 Gm1335-201ENSMUST00000121653 386 ntBASIC14.34□□□□□ -0.11
Gm28047Q3US59 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28047Q3US59 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm28047Q3US59 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28047Q3US59 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.34□□□□□ -0.11
Gm28047Q3US59 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28047Q3US59 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Gm28047Q3US59 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28047Q3US59 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28047Q3US59 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28047Q3US59 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28047Q3US59 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28047Q3US59 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Gm28047Q3US59 Matn2-203ENSMUST00000226766 3252 ntBASIC14.33□□□□□ -0.11
Gm28047Q3US59 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Gm28047Q3US59 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Gm28047Q3US59 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.33□□□□□ -0.12
Gm28047Q3US59 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Rmrp-201ENSMUST00000157463 271 ntBASIC14.33□□□□□ -0.12
Gm28047Q3US59 Gm27390-201ENSMUST00000184516 176 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms