Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col5a2Q3U962 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.8□□□□□ -0.04
Col5a2Q3U962 Gm12856-201ENSMUST00000119471 1293 ntBASIC14.8□□□□□ -0.04
Col5a2Q3U962 Gm12516-201ENSMUST00000120819 385 ntBASIC14.8□□□□□ -0.04
Col5a2Q3U962 Gm13937-201ENSMUST00000121000 988 ntBASIC14.8□□□□□ -0.04
Col5a2Q3U962 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col5a2Q3U962 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col5a2Q3U962 Gm27910-201ENSMUST00000185004 107 ntBASIC14.8□□□□□ -0.04
Col5a2Q3U962 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.8□□□□□ -0.04
Col5a2Q3U962 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Col5a2Q3U962 AC166341.2-201ENSMUST00000220571 120 ntBASIC14.8□□□□□ -0.04
Col5a2Q3U962 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC14.8□□□□□ -0.04
Col5a2Q3U962 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col5a2Q3U962 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col5a2Q3U962 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col5a2Q3U962 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col5a2Q3U962 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col5a2Q3U962 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col5a2Q3U962 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col5a2Q3U962 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col5a2Q3U962 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col5a2Q3U962 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Gm8737-201ENSMUST00000122208 642 ntBASIC14.79□□□□□ -0.04
Col5a2Q3U962 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Gm6485-201ENSMUST00000160676 439 ntBASIC14.79□□□□□ -0.04
Col5a2Q3U962 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC14.79□□□□□ -0.04
Col5a2Q3U962 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Ighv5-11-201ENSMUST00000193354 371 ntBASIC14.79□□□□□ -0.04
Col5a2Q3U962 Gm44270-201ENSMUST00000203084 1234 ntBASIC14.79□□□□□ -0.04
Col5a2Q3U962 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Gm9139-201ENSMUST00000218817 700 ntBASIC14.79□□□□□ -0.04
Col5a2Q3U962 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.79□□□□□ -0.04
Col5a2Q3U962 AC154184.3-201ENSMUST00000225620 1090 ntBASIC14.79□□□□□ -0.04
Col5a2Q3U962 Mirlet7i-201ENSMUST00000083472 85 ntBASIC14.79□□□□□ -0.04
Col5a2Q3U962 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.79□□□□□ -0.04
Col5a2Q3U962 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Gm24231-201ENSMUST00000104315 133 ntBASIC14.78□□□□□ -0.04
Col5a2Q3U962 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Gm11949-201ENSMUST00000117640 372 ntBASIC14.78□□□□□ -0.04
Col5a2Q3U962 Gm12579-201ENSMUST00000118040 783 ntBASIC14.78□□□□□ -0.04
Col5a2Q3U962 Gm11511-201ENSMUST00000118146 540 ntBASIC14.78□□□□□ -0.04
Col5a2Q3U962 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col5a2Q3U962 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC14.78□□□□□ -0.04
Col5a2Q3U962 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC14.78□□□□□ -0.04
Col5a2Q3U962 Gm43186-201ENSMUST00000198130 824 ntBASIC14.78□□□□□ -0.04
Col5a2Q3U962 Gm3619-201ENSMUST00000219947 775 ntBASIC14.78□□□□□ -0.04
Col5a2Q3U962 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.78□□□□□ -0.04
Col5a2Q3U962 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Col5a2Q3U962 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms